Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Cops6O88545 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Cops6O88545 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.4■□□□□ 0.38
Cops6O88545 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Cops6O88545 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.4■□□□□ 0.38
Cops6O88545 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Cops6O88545 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.4■□□□□ 0.38
Cops6O88545 Gm15240-201ENSMUST00000118156 720 ntBASIC17.4■□□□□ 0.38
Cops6O88545 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cops6O88545 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cops6O88545 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cops6O88545 Mir7654-201ENSMUST00000185082 70 ntBASIC17.4■□□□□ 0.38
Cops6O88545 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.4■□□□□ 0.38
Cops6O88545 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.4■□□□□ 0.38
Cops6O88545 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cops6O88545 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cops6O88545 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cops6O88545 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cops6O88545 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cops6O88545 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.39■□□□□ 0.37
Cops6O88545 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.39■□□□□ 0.37
Cops6O88545 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Gm27701-201ENSMUST00000184498 110 ntBASIC17.39■□□□□ 0.37
Cops6O88545 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.39■□□□□ 0.37
Cops6O88545 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Gm25857-201ENSMUST00000082788 129 ntBASIC17.39■□□□□ 0.37
Cops6O88545 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.39■□□□□ 0.37
Cops6O88545 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cops6O88545 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cops6O88545 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Gm15806-201ENSMUST00000120696 955 ntBASIC17.38■□□□□ 0.37
Cops6O88545 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.38■□□□□ 0.37
Cops6O88545 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.38■□□□□ 0.37
Cops6O88545 Gm28911-201ENSMUST00000188837 117 ntBASIC17.38■□□□□ 0.37
Cops6O88545 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.38■□□□□ 0.37
Cops6O88545 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.38■□□□□ 0.37
Cops6O88545 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.38■□□□□ 0.37
Cops6O88545 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.38■□□□□ 0.37
Cops6O88545 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cops6O88545 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cops6O88545 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cops6O88545 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.38■□□□□ 0.37
Cops6O88545 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cops6O88545 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
Cops6O88545 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.37■□□□□ 0.37
Cops6O88545 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.37■□□□□ 0.37
Cops6O88545 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.37■□□□□ 0.37
Cops6O88545 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.37■□□□□ 0.37
Cops6O88545 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.37■□□□□ 0.37
Cops6O88545 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.37■□□□□ 0.37
Cops6O88545 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.37■□□□□ 0.37
Cops6O88545 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops6O88545 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms