Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.01□□□□□ -0.33
Matn3O35701 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.01□□□□□ -0.33
Matn3O35701 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.01□□□□□ -0.33
Matn3O35701 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.01□□□□□ -0.33
Matn3O35701 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Rprl3-201ENSMUST00000157400 290 ntBASIC13.01□□□□□ -0.33
Matn3O35701 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.01□□□□□ -0.33
Matn3O35701 Gm25745-201ENSMUST00000174945 133 ntBASIC13.01□□□□□ -0.33
Matn3O35701 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.01□□□□□ -0.33
Matn3O35701 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.01□□□□□ -0.33
Matn3O35701 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.01□□□□□ -0.33
Matn3O35701 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.01□□□□□ -0.33
Matn3O35701 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.01□□□□□ -0.33
Matn3O35701 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Matn3O35701 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Matn3O35701 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn3O35701 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Matn3O35701 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Matn3O35701 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Matn3O35701 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13□□□□□ -0.33
Matn3O35701 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Matn3O35701 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Matn3O35701 Gm12895-201ENSMUST00000122214 226 ntBASIC13□□□□□ -0.33
Matn3O35701 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13□□□□□ -0.33
Matn3O35701 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Gm9726-201ENSMUST00000180321 678 ntBASIC13□□□□□ -0.33
Matn3O35701 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13□□□□□ -0.33
Matn3O35701 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Matn3O35701 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Gm27459-201ENSMUST00000184860 107 ntBASIC13□□□□□ -0.33
Matn3O35701 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Matn3O35701 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13□□□□□ -0.33
Matn3O35701 AC153889.1-201ENSMUST00000219257 330 ntBASIC13□□□□□ -0.33
Matn3O35701 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13□□□□□ -0.33
Matn3O35701 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Matn3O35701 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13□□□□□ -0.33
Matn3O35701 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13□□□□□ -0.33
Matn3O35701 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Matn3O35701 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Matn3O35701 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Matn3O35701 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Matn3O35701 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.99□□□□□ -0.33
Matn3O35701 Gm12497-201ENSMUST00000138778 237 ntBASIC12.99□□□□□ -0.33
Matn3O35701 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.99□□□□□ -0.33
Matn3O35701 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Matn3O35701 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Matn3O35701 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Matn3O35701 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms