Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Gm11803-201ENSMUST00000119966 444 ntBASIC18.15■□□□□ 0.5
Col15a1O35206 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC18.15■□□□□ 0.5
Col15a1O35206 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Col15a1O35206 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC18.15■□□□□ 0.5
Col15a1O35206 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC18.15■□□□□ 0.5
Col15a1O35206 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.15■□□□□ 0.5
Col15a1O35206 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.15■□□□□ 0.5
Col15a1O35206 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Col15a1O35206 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Col15a1O35206 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col15a1O35206 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col15a1O35206 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col15a1O35206 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col15a1O35206 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col15a1O35206 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Col15a1O35206 Ankra2-208ENSMUST00000226100 1476 ntBASIC18.14■□□□□ 0.49
Col15a1O35206 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC18.14■□□□□ 0.49
Col15a1O35206 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Col15a1O35206 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.14■□□□□ 0.49
Col15a1O35206 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.14■□□□□ 0.49
Col15a1O35206 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Col15a1O35206 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC18.14■□□□□ 0.49
Col15a1O35206 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Col15a1O35206 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Col15a1O35206 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col15a1O35206 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.13■□□□□ 0.49
Col15a1O35206 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Col15a1O35206 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Gm5187-201ENSMUST00000117317 991 ntBASIC18.13■□□□□ 0.49
Col15a1O35206 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC18.13■□□□□ 0.49
Col15a1O35206 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.13■□□□□ 0.49
Col15a1O35206 Gm24644-201ENSMUST00000157114 139 ntBASIC18.13■□□□□ 0.49
Col15a1O35206 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Gm27514-201ENSMUST00000183692 110 ntBASIC18.13■□□□□ 0.49
Col15a1O35206 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.13■□□□□ 0.49
Col15a1O35206 Gm38671-201ENSMUST00000200573 130 ntBASIC18.13■□□□□ 0.49
Col15a1O35206 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC18.13■□□□□ 0.49
Col15a1O35206 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.13■□□□□ 0.49
Col15a1O35206 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col15a1O35206 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Col15a1O35206 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col15a1O35206 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col15a1O35206 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Col15a1O35206 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC18.12■□□□□ 0.49
Col15a1O35206 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col15a1O35206 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col15a1O35206 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col15a1O35206 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col15a1O35206 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.12■□□□□ 0.49
Col15a1O35206 Gm16177-201ENSMUST00000120728 718 ntBASIC18.12■□□□□ 0.49
Col15a1O35206 Gm38223-201ENSMUST00000194484 695 ntBASIC18.12■□□□□ 0.49
Col15a1O35206 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col15a1O35206 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC18.12■□□□□ 0.49
Col15a1O35206 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Col15a1O35206 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col15a1O35206 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Col15a1O35206 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col15a1O35206 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col15a1O35206 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col15a1O35206 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC18.11■□□□□ 0.49
Col15a1O35206 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Col15a1O35206 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col15a1O35206 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col15a1O35206 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col15a1O35206 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Col15a1O35206 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col15a1O35206 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms