Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrn3B2RS91 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrn3B2RS91 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrn3B2RS91 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.44□□□□□ -0.1
Rrn3B2RS91 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrn3B2RS91 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rrn3B2RS91 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rrn3B2RS91 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrn3B2RS91 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rrn3B2RS91 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rrn3B2RS91 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrn3B2RS91 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rrn3B2RS91 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rrn3B2RS91 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rrn3B2RS91 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.43□□□□□ -0.1
Rrn3B2RS91 Gm15693-201ENSMUST00000120470 637 ntBASIC14.43□□□□□ -0.1
Rrn3B2RS91 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rrn3B2RS91 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.42□□□□□ -0.1
Rrn3B2RS91 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Gm22175-201ENSMUST00000175007 78 ntBASIC14.42□□□□□ -0.1
Rrn3B2RS91 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrn3B2RS91 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.42□□□□□ -0.1
Rrn3B2RS91 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rrn3B2RS91 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.41□□□□□ -0.1
Rrn3B2RS91 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Mir6956-201ENSMUST00000183598 62 ntBASIC14.41□□□□□ -0.1
Rrn3B2RS91 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Gm5779-201ENSMUST00000218467 910 ntBASIC14.41□□□□□ -0.1
Rrn3B2RS91 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.41□□□□□ -0.1
Rrn3B2RS91 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms