Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gm8749-201ENSMUST00000117737 331 ntBASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gm15794-201ENSMUST00000120182 631 ntBASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Mir3081-201ENSMUST00000175305 84 ntBASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gm8655-201ENSMUST00000221159 852 ntBASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7n-4A0A075B620 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms