Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn8aQ9WTU3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Gm15678-201ENSMUST00000117573 960 ntBASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn8aQ9WTU3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Gm21470-201ENSMUST00000187680 696 ntBASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn8aQ9WTU3 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Gm15240-201ENSMUST00000118156 720 ntBASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Gm17795-201ENSMUST00000214505 757 ntBASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.3□□□□□ -0.12
Scn8aQ9WTU3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms