Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Gm17271-201ENSMUST00000165535 355 ntBASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cpne8Q9DC53 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Gm45612-201ENSMUST00000211320 160 ntBASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne8Q9DC53 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne8Q9DC53 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cpne8Q9DC53 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms