Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39lQ9CQD0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Gm45058-201ENSMUST00000205810 766 ntBASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Gm18622-201ENSMUST00000219361 595 ntBASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 AC127349.1-201ENSMUST00000224590 266 ntBASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Vti1a-206ENSMUST00000225529 1244 ntBASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39lQ9CQD0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Gm20760-201ENSMUST00000179197 648 ntBASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Gm18959-201ENSMUST00000208954 655 ntBASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms