Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb22Q91XZ8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb22Q91XZ8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
Pcdhb22Q91XZ8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb22Q91XZ8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb22Q91XZ8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Gm15653-201ENSMUST00000119247 907 ntBASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Shd-206ENSMUST00000225145 998 ntBASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb22Q91XZ8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms