Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm3222-201ENSMUST00000071282 990 ntBASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rtn4rl1Q8K0S5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm26464-201ENSMUST00000157094 305 ntBASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Efs-202ENSMUST00000227037 2540 ntBASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtn4rl1Q8K0S5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm14660-201ENSMUST00000119809 575 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm27847-201ENSMUST00000183711 107 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm27375-201ENSMUST00000183799 107 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm45784-201ENSMUST00000188360 142 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm37424-201ENSMUST00000191727 561 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm10012-201ENSMUST00000078252 192 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Gm6091-201ENSMUST00000098307 165 ntBASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtn4rl1Q8K0S5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms