Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Mir1895-201ENSMUST00000122615 79 ntBASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Gm2213-201ENSMUST00000197485 688 ntBASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.48□□□□□ -0.25
Clrn3Q8BHH8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Gm2756-201ENSMUST00000195851 400 ntBASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Olfr286-202ENSMUST00000205305 969 ntBASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Gm45098-201ENSMUST00000207179 657 ntBASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn3Q8BHH8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn3Q8BHH8 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.46□□□□□ -0.25
Clrn3Q8BHH8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn3Q8BHH8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn3Q8BHH8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn3Q8BHH8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Clrn3Q8BHH8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Clrn3Q8BHH8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms