Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp6nlQ80XC3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp6nlQ80XC3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Gm4804-201ENSMUST00000182234 999 ntBASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp6nlQ80XC3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp6nlQ80XC3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms