Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf40bQ80W14 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 AY702102-202ENSMUST00000194651 1173 ntBASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf40bQ80W14 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.52■□□□□ 0.24
Prpf40bQ80W14 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Gm46209-201ENSMUST00000217912 553 ntBASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf40bQ80W14 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
Prpf40bQ80W14 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Gm43703-201ENSMUST00000200523 763 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms