Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc2Q80VA5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc2Q80VA5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc2Q80VA5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc2Q80VA5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc2Q80VA5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc2Q80VA5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc2Q80VA5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc2Q80VA5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Gm10766-202ENSMUST00000194123 606 ntBASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc2Q80VA5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Gm15824-201ENSMUST00000119516 955 ntBASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Gm11918-201ENSMUST00000121660 179 ntBASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Sh3tc2Q80VA5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Gm45098-201ENSMUST00000207179 657 ntBASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3tc2Q80VA5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms