Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 AC124067.4-201ENST00000519691 2379 ntBASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRFAM7AQ494W8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 LINC00602-201ENST00000629776 2065 ntBASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
CHRFAM7AQ494W8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 KRT18P23-201ENST00000435622 1283 ntBASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 AC092183.1-201ENST00000469884 875 ntBASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 GUSBP12-201ENST00000513727 720 ntBASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 REXO1L6P-202ENST00000619970 1078 ntBASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 AL138688.1-201ENST00000624851 1594 ntBASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CHRFAM7AQ494W8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms