Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Rps28P62858 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rps28P62858 Gm42449-201ENSMUST00000200349 2258 ntBASIC8.37□□□□□ -1.07
Rps28P62858 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Rps28P62858 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
Rps28P62858 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
Rps28P62858 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC8.37□□□□□ -1.07
Rps28P62858 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Rps28P62858 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC8.37□□□□□ -1.07
Rps28P62858 Gm10829-201ENSMUST00000202084 2988 ntBASIC8.37□□□□□ -1.07
Rps28P62858 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Rps28P62858 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Rps28P62858 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC8.37□□□□□ -1.07
Rps28P62858 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC8.37□□□□□ -1.07
Rps28P62858 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rps28P62858 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Gm43931-201ENSMUST00000204817 2870 ntBASIC8.36□□□□□ -1.07
Rps28P62858 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Gm18983-201ENSMUST00000222884 2729 ntBASIC8.36□□□□□ -1.07
Rps28P62858 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Rps28P62858 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 AC160393.1-201ENSMUST00000218378 1279 ntBASIC8.36□□□□□ -1.07
Rps28P62858 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Rps28P62858 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC8.36□□□□□ -1.07
Rps28P62858 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC8.36□□□□□ -1.07
Rps28P62858 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Rps28P62858 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC8.36□□□□□ -1.07
Rps28P62858 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Rps28P62858 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms