Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Timp3P39876 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Timp3P39876 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Timp3P39876 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.77□□□□□ -0.53
Timp3P39876 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.77□□□□□ -0.53
Timp3P39876 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.77□□□□□ -0.53
Timp3P39876 Gm15483-201ENSMUST00000120338 456 ntBASIC11.77□□□□□ -0.53
Timp3P39876 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.77□□□□□ -0.53
Timp3P39876 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.77□□□□□ -0.53
Timp3P39876 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Timp3P39876 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.77□□□□□ -0.53
Timp3P39876 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.77□□□□□ -0.53
Timp3P39876 Gm27622-201ENSMUST00000183779 60 ntBASIC11.77□□□□□ -0.53
Timp3P39876 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Timp3P39876 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.77□□□□□ -0.53
Timp3P39876 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.77□□□□□ -0.53
Timp3P39876 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
Timp3P39876 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Timp3P39876 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.76□□□□□ -0.53
Timp3P39876 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.76□□□□□ -0.53
Timp3P39876 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Gm6415-201ENSMUST00000118488 348 ntBASIC11.76□□□□□ -0.53
Timp3P39876 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.76□□□□□ -0.53
Timp3P39876 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 Gm25144-201ENSMUST00000179561 110 ntBASIC11.76□□□□□ -0.53
Timp3P39876 Gm25352-201ENSMUST00000179815 110 ntBASIC11.76□□□□□ -0.53
Timp3P39876 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.76□□□□□ -0.53
Timp3P39876 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.76□□□□□ -0.53
Timp3P39876 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Timp3P39876 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.76□□□□□ -0.53
Timp3P39876 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Timp3P39876 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
Timp3P39876 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms