Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccnb1ip1D3Z3K2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm15358-201ENSMUST00000119249 520 ntBASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccnb1ip1D3Z3K2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm13312-201ENSMUST00000119631 718 ntBASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm21559-201ENSMUST00000220638 855 ntBASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm8587-201ENSMUST00000076538 843 ntBASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ccnb1ip1D3Z3K2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccnb1ip1D3Z3K2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccnb1ip1D3Z3K2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccnb1ip1D3Z3K2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccnb1ip1D3Z3K2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccnb1ip1D3Z3K2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms