Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.48□□□□□ -0.09
Cdk9Q99J95 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Gm28659-201ENSMUST00000188013 759 ntBASIC14.48□□□□□ -0.09
Cdk9Q99J95 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.48□□□□□ -0.09
Cdk9Q99J95 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk9Q99J95 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Mir8098-201ENSMUST00000184011 137 ntBASIC14.47□□□□□ -0.09
Cdk9Q99J95 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Cdk9Q99J95 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk9Q99J95 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Grk6-205ENSMUST00000224653 2976 ntBASIC14.46□□□□□ -0.09
Cdk9Q99J95 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdk9Q99J95 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdk9Q99J95 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.46□□□□□ -0.09
Cdk9Q99J95 Gm5864-201ENSMUST00000202263 970 ntBASIC14.46□□□□□ -0.09
Cdk9Q99J95 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk9Q99J95 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk9Q99J95 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk9Q99J95 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.46□□□□□ -0.1
Cdk9Q99J95 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk9Q99J95 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cdk9Q99J95 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk9Q99J95 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk9Q99J95 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk9Q99J95 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk9Q99J95 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms