Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.59■□□□□ 0.25
Smc1bQ920F6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc1bQ920F6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Smc1bQ920F6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc1bQ920F6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc1bQ920F6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc1bQ920F6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc1bQ920F6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc1bQ920F6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1bQ920F6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1bQ920F6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc1bQ920F6 Gm45384-201ENSMUST00000210451 277 ntBASIC16.58■□□□□ 0.24
Smc1bQ920F6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1bQ920F6 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.58■□□□□ 0.24
Smc1bQ920F6 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.58■□□□□ 0.24
Smc1bQ920F6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc1bQ920F6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc1bQ920F6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1bQ920F6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Smc1bQ920F6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Smc1bQ920F6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1bQ920F6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smc1bQ920F6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.57■□□□□ 0.24
Smc1bQ920F6 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.57■□□□□ 0.24
Smc1bQ920F6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.57■□□□□ 0.24
Smc1bQ920F6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.57■□□□□ 0.24
Smc1bQ920F6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.57■□□□□ 0.24
Smc1bQ920F6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1bQ920F6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Smc1bQ920F6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Gm23984-201ENSMUST00000157139 203 ntBASIC16.56■□□□□ 0.24
Smc1bQ920F6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Gm6180-201ENSMUST00000065243 498 ntBASIC16.56■□□□□ 0.24
Smc1bQ920F6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc1bQ920F6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.56■□□□□ 0.24
Smc1bQ920F6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smc1bQ920F6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.55■□□□□ 0.24
Smc1bQ920F6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc1bQ920F6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms