Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.19□□□□□ -0.14
Vsx1Q91V10 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.19□□□□□ -0.14
Vsx1Q91V10 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.18□□□□□ -0.14
Vsx1Q91V10 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.18□□□□□ -0.14
Vsx1Q91V10 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.18□□□□□ -0.14
Vsx1Q91V10 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Gm27701-201ENSMUST00000184498 110 ntBASIC14.18□□□□□ -0.14
Vsx1Q91V10 Gm28911-201ENSMUST00000188837 117 ntBASIC14.18□□□□□ -0.14
Vsx1Q91V10 Gm45841-201ENSMUST00000207700 164 ntBASIC14.18□□□□□ -0.14
Vsx1Q91V10 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Gm19220-201ENSMUST00000222682 803 ntBASIC14.18□□□□□ -0.14
Vsx1Q91V10 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.18□□□□□ -0.14
Vsx1Q91V10 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.17□□□□□ -0.14
Vsx1Q91V10 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.17□□□□□ -0.14
Vsx1Q91V10 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.17□□□□□ -0.14
Vsx1Q91V10 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.17□□□□□ -0.14
Vsx1Q91V10 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.17□□□□□ -0.14
Vsx1Q91V10 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.17□□□□□ -0.14
Vsx1Q91V10 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx1Q91V10 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.17□□□□□ -0.14
Vsx1Q91V10 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx1Q91V10 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms