Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Q8VDP2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Q8VDP2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Q8VDP2 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.03□□□□□ -0.16
Q8VDP2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.03□□□□□ -0.16
Q8VDP2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Q8VDP2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Q8VDP2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Q8VDP2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Q8VDP2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q8VDP2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Q8VDP2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.02□□□□□ -0.16
Q8VDP2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.02□□□□□ -0.16
Q8VDP2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.02□□□□□ -0.16
Q8VDP2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Q8VDP2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Q8VDP2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Q8VDP2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q8VDP2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q8VDP2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q8VDP2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.02□□□□□ -0.17
Q8VDP2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.02□□□□□ -0.17
Q8VDP2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Q8VDP2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.02□□□□□ -0.17
Q8VDP2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Q8VDP2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Q8VDP2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.02□□□□□ -0.17
Q8VDP2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q8VDP2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
Q8VDP2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Q8VDP2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Q8VDP2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Q8VDP2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Q8VDP2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.01□□□□□ -0.17
Q8VDP2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.01□□□□□ -0.17
Q8VDP2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.01□□□□□ -0.17
Q8VDP2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q8VDP2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Q8VDP2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.01□□□□□ -0.17
Q8VDP2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.01□□□□□ -0.17
Q8VDP2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms