Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm37935-201ENSMUST00000192012 982 ntBASIC13.88□□□□□ -0.19
Rnf8Q8VC56 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Rnf8Q8VC56 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Gm27301-201ENSMUST00000184012 127 ntBASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.87□□□□□ -0.19
Rnf8Q8VC56 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.87□□□□□ -0.19
Rnf8Q8VC56 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf8Q8VC56 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Gm17271-201ENSMUST00000165535 355 ntBASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Gm43767-201ENSMUST00000198933 381 ntBASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rnf8Q8VC56 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.85□□□□□ -0.19
Rnf8Q8VC56 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.85□□□□□ -0.19
Rnf8Q8VC56 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf8Q8VC56 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Rnf8Q8VC56 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms