Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim61Q8JZK6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim61Q8JZK6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim61Q8JZK6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim61Q8JZK6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim61Q8JZK6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim61Q8JZK6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim61Q8JZK6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim61Q8JZK6 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.09■□□□□ 0.01
Trim61Q8JZK6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim61Q8JZK6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim61Q8JZK6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim61Q8JZK6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim61Q8JZK6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim61Q8JZK6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim61Q8JZK6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trim61Q8JZK6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim61Q8JZK6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trim61Q8JZK6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.08■□□□□ 0
Trim61Q8JZK6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.08■□□□□ 0
Trim61Q8JZK6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.08■□□□□ 0
Trim61Q8JZK6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.08■□□□□ 0
Trim61Q8JZK6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.08■□□□□ 0
Trim61Q8JZK6 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.08■□□□□ 0
Trim61Q8JZK6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim61Q8JZK6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim61Q8JZK6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.07■□□□□ 0
Trim61Q8JZK6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.07■□□□□ 0
Trim61Q8JZK6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim61Q8JZK6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim61Q8JZK6 Gm14042-201ENSMUST00000120139 833 ntBASIC15.07■□□□□ 0
Trim61Q8JZK6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.07■□□□□ 0
Trim61Q8JZK6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.07■□□□□ 0
Trim61Q8JZK6 Gm42612-201ENSMUST00000197986 623 ntBASIC15.07■□□□□ 0
Trim61Q8JZK6 Gm43170-201ENSMUST00000199827 612 ntBASIC15.07■□□□□ 0
Trim61Q8JZK6 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.07■□□□□ 0
Trim61Q8JZK6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim61Q8JZK6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.07■□□□□ 0
Trim61Q8JZK6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trim61Q8JZK6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim61Q8JZK6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Gm8515-201ENSMUST00000194852 576 ntBASIC15.06■□□□□ 0
Trim61Q8JZK6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.06■□□□□ 0
Trim61Q8JZK6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.06■□□□□ 0
Trim61Q8JZK6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim61Q8JZK6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.06■□□□□ 0
Trim61Q8JZK6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim61Q8JZK6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.06■□□□□ 0
Trim61Q8JZK6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms