Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Gm37230-201ENSMUST00000194491 818 ntBASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Rps4l-201ENSMUST00000071745 943 ntBASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd4Q8CC84 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Gm9103-201ENSMUST00000119371 405 ntBASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Birc2-201ENSMUST00000054878 378 ntBASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd4Q8CC84 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lysmd4Q8CC84 Gm27459-201ENSMUST00000184860 107 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms