Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptcd1Q8C2E4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptcd1Q8C2E4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptcd1Q8C2E4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptcd1Q8C2E4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ptcd1Q8C2E4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptcd1Q8C2E4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Ptcd1Q8C2E4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ptcd1Q8C2E4 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptcd1Q8C2E4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ptcd1Q8C2E4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ptcd1Q8C2E4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptcd1Q8C2E4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Gm12957-201ENSMUST00000117835 377 ntBASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptcd1Q8C2E4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Gm13464-201ENSMUST00000119418 935 ntBASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Gm45331-201ENSMUST00000209868 554 ntBASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Ptcd1Q8C2E4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms