Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smco3Q8BQM7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smco3Q8BQM7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smco3Q8BQM7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco3Q8BQM7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Smco3Q8BQM7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Smco3Q8BQM7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms