Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ttc28Q80XJ3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ttc28Q80XJ3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.99□□□□□ -0.49
Ttc28Q80XJ3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ttc28Q80XJ3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm18056-201ENSMUST00000207670 568 ntBASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm18061-201ENSMUST00000208350 562 ntBASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm18063-201ENSMUST00000208529 568 ntBASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm18052-201ENSMUST00000208750 559 ntBASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm13612-201ENSMUST00000119276 390 ntBASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ttc28Q80XJ3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Gm12384-201ENSMUST00000119228 919 ntBASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Gm7399-201ENSMUST00000032395 858 ntBASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.97□□□□□ -0.49
Ttc28Q80XJ3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms