Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Gm14042-201ENSMUST00000120139 833 ntBASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Gm10275-202ENSMUST00000168697 495 ntBASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Gm10275-201ENSMUST00000092620 635 ntBASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh19Q80TF3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh19Q80TF3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh19Q80TF3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Gm9229-201ENSMUST00000222777 126 ntBASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh19Q80TF3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh19Q80TF3 Gm14719-201ENSMUST00000121891 340 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms