Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Gm13823-201ENSMUST00000119930 345 ntBASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Mir7684-201ENSMUST00000183858 60 ntBASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb4Q6P8W9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Gm14767-201ENSMUST00000121559 586 ntBASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Gm5479-201ENSMUST00000160578 435 ntBASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb4Q6P8W9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.05■□□□□ 0
Hmgb4Q6P8W9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmgb4Q6P8W9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Hmgb4Q6P8W9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmgb4Q6P8W9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.05■□□□□ 0
Hmgb4Q6P8W9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmgb4Q6P8W9 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.05■□□□□ 0
Hmgb4Q6P8W9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Hmgb4Q6P8W9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmgb4Q6P8W9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Hmgb4Q6P8W9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Gm11424-201ENSMUST00000121929 829 ntBASIC15.05■□□□□ -0
Hmgb4Q6P8W9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Gm27533-201ENSMUST00000183800 152 ntBASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hmgb4Q6P8W9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms