Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.16■□□□□ 0.5
Clcn1Q64347 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.16■□□□□ 0.5
Clcn1Q64347 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.15■□□□□ 0.5
Clcn1Q64347 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.15■□□□□ 0.5
Clcn1Q64347 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.15■□□□□ 0.5
Clcn1Q64347 Gm15678-201ENSMUST00000117573 960 ntBASIC18.15■□□□□ 0.5
Clcn1Q64347 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.15■□□□□ 0.5
Clcn1Q64347 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Clcn1Q64347 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn1Q64347 CT025610.1-201ENSMUST00000224552 1786 ntBASIC18.14■□□□□ 0.5
Clcn1Q64347 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Clcn1Q64347 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Clcn1Q64347 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Clcn1Q64347 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.14■□□□□ 0.49
Clcn1Q64347 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Clcn1Q64347 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.14■□□□□ 0.49
Clcn1Q64347 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.14■□□□□ 0.49
Clcn1Q64347 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.14■□□□□ 0.49
Clcn1Q64347 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.14■□□□□ 0.49
Clcn1Q64347 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.14■□□□□ 0.49
Clcn1Q64347 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.14■□□□□ 0.49
Clcn1Q64347 Gm44719-201ENSMUST00000206404 149 ntBASIC18.14■□□□□ 0.49
Clcn1Q64347 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Clcn1Q64347 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Clcn1Q64347 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Clcn1Q64347 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn1Q64347 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.13■□□□□ 0.49
Clcn1Q64347 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Gm15460-201ENSMUST00000118147 391 ntBASIC18.13■□□□□ 0.49
Clcn1Q64347 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.13■□□□□ 0.49
Clcn1Q64347 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.13■□□□□ 0.49
Clcn1Q64347 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.13■□□□□ 0.49
Clcn1Q64347 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.13■□□□□ 0.49
Clcn1Q64347 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.13■□□□□ 0.49
Clcn1Q64347 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.13■□□□□ 0.49
Clcn1Q64347 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.13■□□□□ 0.49
Clcn1Q64347 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Clcn1Q64347 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn1Q64347 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Clcn1Q64347 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms