Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Sox17Q61473 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox17Q61473 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox17Q61473 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox17Q61473 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox17Q61473 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44357-201ENSMUST00000195897 142 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm19658-201ENSMUST00000196231 138 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44367-201ENSMUST00000196836 138 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44350-201ENSMUST00000197197 138 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44390-201ENSMUST00000197533 144 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44313-201ENSMUST00000198018 138 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44486-201ENSMUST00000198508 138 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44314-201ENSMUST00000199263 138 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44394-201ENSMUST00000199558 138 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44484-201ENSMUST00000199873 138 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44466-201ENSMUST00000200264 138 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm44359-201ENSMUST00000200671 138 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.48□□□□□ -0.25
Sox17Q61473 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox17Q61473 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox17Q61473 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox17Q61473 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox17Q61473 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox17Q61473 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox17Q61473 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Sox17Q61473 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Sox17Q61473 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.47□□□□□ -0.25
Sox17Q61473 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.47□□□□□ -0.25
Sox17Q61473 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox17Q61473 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Sox17Q61473 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Sox17Q61473 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Gm18246-201ENSMUST00000221023 728 ntBASIC13.47□□□□□ -0.25
Sox17Q61473 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.47□□□□□ -0.25
Sox17Q61473 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox17Q61473 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox17Q61473 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms