Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Gm44608-201ENSMUST00000206827 855 ntBASIC15.66■□□□□ 0.1
Cln3Q61124 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Gm18027-201ENSMUST00000218947 619 ntBASIC15.66■□□□□ 0.1
Cln3Q61124 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cln3Q61124 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.66■□□□□ 0.1
Cln3Q61124 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cln3Q61124 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.66■□□□□ 0.1
Cln3Q61124 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cln3Q61124 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cln3Q61124 Sybu-209ENSMUST00000228639 4113 ntBASIC15.65■□□□□ 0.1
Cln3Q61124 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.65■□□□□ 0.1
Cln3Q61124 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cln3Q61124 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cln3Q61124 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.65■□□□□ 0.1
Cln3Q61124 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cln3Q61124 Gm18905-201ENSMUST00000205454 928 ntBASIC15.65■□□□□ 0.1
Cln3Q61124 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.65■□□□□ 0.1
Cln3Q61124 Gm5425-201ENSMUST00000214125 459 ntBASIC15.65■□□□□ 0.1
Cln3Q61124 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.65■□□□□ 0.1
Cln3Q61124 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.65■□□□□ 0.1
Cln3Q61124 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cln3Q61124 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.65■□□□□ 0.1
Cln3Q61124 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cln3Q61124 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cln3Q61124 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cln3Q61124 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Cln3Q61124 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Cln3Q61124 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.64■□□□□ 0.09
Cln3Q61124 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Mir1894-201ENSMUST00000122802 81 ntBASIC15.64■□□□□ 0.09
Cln3Q61124 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.64■□□□□ 0.09
Cln3Q61124 Mir1938-201ENSMUST00000158746 100 ntBASIC15.64■□□□□ 0.09
Cln3Q61124 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.64■□□□□ 0.09
Cln3Q61124 Gm6007-201ENSMUST00000208170 823 ntBASIC15.64■□□□□ 0.09
Cln3Q61124 Gm8463-201ENSMUST00000208573 613 ntBASIC15.64■□□□□ 0.09
Cln3Q61124 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cln3Q61124 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.64■□□□□ 0.09
Cln3Q61124 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cln3Q61124 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.64■□□□□ 0.09
Cln3Q61124 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.64■□□□□ 0.09
Cln3Q61124 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.63■□□□□ 0.09
Cln3Q61124 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cln3Q61124 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cln3Q61124 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cln3Q61124 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cln3Q61124 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cln3Q61124 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cln3Q61124 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cln3Q61124 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cln3Q61124 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.63■□□□□ 0.09
Cln3Q61124 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms