Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-3Q5R1C3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Gm18032-201ENSMUST00000222541 538 ntBASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 AC125350.1-201ENSMUST00000225115 903 ntBASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Gm9987-201ENSMUST00000069768 567 ntBASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-3Q5R1C3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-3Q5R1C3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Trav3-3Q5R1C3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms