Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RUNDC3AQ59EK9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 DOC2GP-204ENST00000639052 2548 ntBASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 KRT18P38-201ENST00000449496 1282 ntBASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 RNF126P1-202ENST00000569893 925 ntBASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNDC3AQ59EK9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 AC117947.1-201ENST00000427448 529 ntBASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 HYMAI.1-201ENST00000620949 238 ntBASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RUNDC3AQ59EK9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 Z83836.1-201ENST00000624605 1642 ntBASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 PCDH8P1-201ENST00000428983 2773 ntBASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms