Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AC087163.2-201ENST00000457299 853 ntBASIC21.17■□□□□ 0.98
CCDC93Q567U6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.17■□□□□ 0.98
CCDC93Q567U6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 AL645728.2-201ENST00000641974 660 ntBASIC21.17■□□□□ 0.98
CCDC93Q567U6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 GK-202ENST00000378941 458 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 AC107890.1-201ENST00000422478 521 ntBASIC21.16■□□□□ 0.98
CCDC93Q567U6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.16■□□□□ 0.98
CCDC93Q567U6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC93Q567U6 AL133373.2-201ENST00000623187 2828 ntBASIC21.16■□□□□ 0.98
CCDC93Q567U6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC93Q567U6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 GPS2P2-201ENST00000430745 888 ntBASIC21.15■□□□□ 0.98
CCDC93Q567U6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 AC125807.1-201ENST00000483097 614 ntBASIC21.15■□□□□ 0.98
CCDC93Q567U6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 AC243562.1-201ENST00000560672 389 ntBASIC21.15■□□□□ 0.98
CCDC93Q567U6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC93Q567U6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC93Q567U6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CCDC93Q567U6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC93Q567U6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC93Q567U6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC93Q567U6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC93Q567U6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC93Q567U6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC93Q567U6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC93Q567U6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC93Q567U6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC93Q567U6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC93Q567U6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC93Q567U6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC93Q567U6 UGT1A2P-201ENST00000454886 866 ntBASIC21.14■□□□□ 0.97
CCDC93Q567U6 AL135744.1-201ENST00000565098 629 ntBASIC21.14■□□□□ 0.97
CCDC93Q567U6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC93Q567U6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms