Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gm16177-201ENSMUST00000120728 718 ntBASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gm10275-202ENSMUST00000168697 495 ntBASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gm19309-201ENSMUST00000218295 205 ntBASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gm45930-201ENSMUST00000221330 292 ntBASIC14.34□□□□□ -0.11
Fam196aQ3USH1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gm10275-201ENSMUST00000092620 635 ntBASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fam196aQ3USH1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Fam196aQ3USH1 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.33□□□□□ -0.11
Fam196aQ3USH1 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.33□□□□□ -0.11
Fam196aQ3USH1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Mir877-201ENSMUST00000104738 85 ntBASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Gm15240-201ENSMUST00000118156 720 ntBASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Gm22331-201ENSMUST00000158066 136 ntBASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Gm27501-201ENSMUST00000183599 107 ntBASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fam196aQ3USH1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Gm13342-201ENSMUST00000121055 207 ntBASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Gm26083-201ENSMUST00000157904 193 ntBASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Gm38002-201ENSMUST00000193255 180 ntBASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Fam196aQ3USH1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.31□□□□□ -0.12
Fam196aQ3USH1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fam196aQ3USH1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fam196aQ3USH1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fam196aQ3USH1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms