Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Pfdn6Q03958 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Pfdn6Q03958 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Pfdn6Q03958 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pfdn6Q03958 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.44□□□□□ -0.1
Pfdn6Q03958 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn6Q03958 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.43□□□□□ -0.1
Pfdn6Q03958 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Gm5479-201ENSMUST00000160578 435 ntBASIC14.43□□□□□ -0.1
Pfdn6Q03958 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn6Q03958 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.42□□□□□ -0.1
Pfdn6Q03958 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Pfdn6Q03958 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.42□□□□□ -0.1
Pfdn6Q03958 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn6Q03958 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.42□□□□□ -0.1
Pfdn6Q03958 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms