Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.37□□□□□ -0.43
Otx1P80205 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.37□□□□□ -0.43
Otx1P80205 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.37□□□□□ -0.43
Otx1P80205 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Otx1P80205 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.37□□□□□ -0.43
Otx1P80205 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Otx1P80205 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Otx1P80205 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Otx1P80205 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Otx1P80205 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Otx1P80205 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.37□□□□□ -0.43
Otx1P80205 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Otx1P80205 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Otx1P80205 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otx1P80205 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.37□□□□□ -0.43
Otx1P80205 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Otx1P80205 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Otx1P80205 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Mir6990-201ENSMUST00000183724 91 ntBASIC12.36□□□□□ -0.43
Otx1P80205 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.36□□□□□ -0.43
Otx1P80205 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.36□□□□□ -0.43
Otx1P80205 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.36□□□□□ -0.43
Otx1P80205 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Otx1P80205 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.36□□□□□ -0.43
Otx1P80205 Gm8396-201ENSMUST00000057361 823 ntBASIC12.36□□□□□ -0.43
Otx1P80205 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Otx1P80205 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Otx1P80205 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Otx1P80205 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.36□□□□□ -0.43
Otx1P80205 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otx1P80205 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Otx1P80205 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Otx1P80205 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Otx1P80205 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Gm12882-201ENSMUST00000121696 517 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Otx1P80205 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.35□□□□□ -0.43
Otx1P80205 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.35□□□□□ -0.43
Otx1P80205 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.35□□□□□ -0.43
Otx1P80205 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.35□□□□□ -0.43
Otx1P80205 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Otx1P80205 Gm29310-201ENSMUST00000185468 696 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Gm21825-201ENSMUST00000185728 696 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Gm29109-201ENSMUST00000185895 696 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Gm21896-201ENSMUST00000186520 696 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Gm21873-201ENSMUST00000186728 696 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Gm21794-201ENSMUST00000187056 696 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Gm21880-201ENSMUST00000187275 696 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Gm21826-201ENSMUST00000187451 696 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Gm21198-201ENSMUST00000188393 696 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Gm21749-201ENSMUST00000189343 696 ntBASIC12.35□□□□□ -0.43
Otx1P80205 Gm21901-201ENSMUST00000189568 696 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms