Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ldb1P70662 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ldb1P70662 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.33□□□□□ -0.12
Ldb1P70662 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.32□□□□□ -0.12
Ldb1P70662 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ldb1P70662 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.32□□□□□ -0.12
Ldb1P70662 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ldb1P70662 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.32□□□□□ -0.12
Ldb1P70662 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.32□□□□□ -0.12
Ldb1P70662 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ldb1P70662 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.32□□□□□ -0.12
Ldb1P70662 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.32□□□□□ -0.12
Ldb1P70662 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.32□□□□□ -0.12
Ldb1P70662 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ldb1P70662 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ldb1P70662 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ldb1P70662 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb1P70662 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.31□□□□□ -0.12
Ldb1P70662 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Ldb1P70662 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ldb1P70662 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ldb1P70662 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Gm14042-201ENSMUST00000120139 833 ntBASIC14.31□□□□□ -0.12
Ldb1P70662 Gm14822-201ENSMUST00000122247 291 ntBASIC14.31□□□□□ -0.12
Ldb1P70662 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.31□□□□□ -0.12
Ldb1P70662 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.31□□□□□ -0.12
Ldb1P70662 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.31□□□□□ -0.12
Ldb1P70662 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.31□□□□□ -0.12
Ldb1P70662 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.31□□□□□ -0.12
Ldb1P70662 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ldb1P70662 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.31□□□□□ -0.12
Ldb1P70662 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.31□□□□□ -0.12
Ldb1P70662 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ldb1P70662 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ldb1P70662 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb1P70662 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.31□□□□□ -0.12
Ldb1P70662 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ldb1P70662 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.31□□□□□ -0.12
Ldb1P70662 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ldb1P70662 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ldb1P70662 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Ldb1P70662 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ldb1P70662 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ldb1P70662 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ldb1P70662 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.3□□□□□ -0.12
Ldb1P70662 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.3□□□□□ -0.12
Ldb1P70662 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.3□□□□□ -0.12
Ldb1P70662 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ldb1P70662 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.3□□□□□ -0.12
Ldb1P70662 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.3□□□□□ -0.12
Ldb1P70662 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.3□□□□□ -0.12
Ldb1P70662 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.3□□□□□ -0.12
Ldb1P70662 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.3□□□□□ -0.12
Ldb1P70662 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ldb1P70662 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ldb1P70662 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ldb1P70662 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ldb1P70662 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ldb1P70662 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms