Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC8.39□□□□□ -1.07
Rps28P62858 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rps28P62858 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Gm5712-201ENSMUST00000199748 1043 ntBASIC8.39□□□□□ -1.07
Rps28P62858 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC8.39□□□□□ -1.07
Rps28P62858 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC8.39□□□□□ -1.07
Rps28P62858 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.39□□□□□ -1.07
Rps28P62858 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Gm21136-201ENSMUST00000186812 2575 ntBASIC8.39□□□□□ -1.07
Rps28P62858 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rps28P62858 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Rps28P62858 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rps28P62858 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
Rps28P62858 AC108858.1-201ENSMUST00000228461 1498 ntBASIC8.38□□□□□ -1.07
Rps28P62858 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Gm8242-201ENSMUST00000193029 1420 ntBASIC8.38□□□□□ -1.07
Rps28P62858 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
Rps28P62858 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Gm42141-201ENSMUST00000196534 2172 ntBASIC8.38□□□□□ -1.07
Rps28P62858 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC8.38□□□□□ -1.07
Rps28P62858 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC8.38□□□□□ -1.07
Rps28P62858 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Rps28P62858 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Gm7977-201ENSMUST00000193787 748 ntBASIC8.38□□□□□ -1.07
Rps28P62858 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC8.38□□□□□ -1.07
Rps28P62858 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Rps28P62858 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Gm44891-201ENSMUST00000208817 2223 ntBASIC8.38□□□□□ -1.07
Rps28P62858 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
Rps28P62858 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Rps28P62858 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC8.38□□□□□ -1.07
Rps28P62858 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rps28P62858 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms