Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp4P59240 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nphp4P59240 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp4P59240 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp4P59240 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp4P59240 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC19.27■□□□□ 0.68
Nphp4P59240 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp4P59240 Gm12416-201ENSMUST00000120911 1008 ntBASIC19.27■□□□□ 0.68
Nphp4P59240 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC19.27■□□□□ 0.68
Nphp4P59240 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC19.27■□□□□ 0.68
Nphp4P59240 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC19.27■□□□□ 0.68
Nphp4P59240 Gm2445-201ENSMUST00000182798 989 ntBASIC19.27■□□□□ 0.68
Nphp4P59240 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp4P59240 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp4P59240 Gm15222-202ENSMUST00000228667 1726 ntBASIC19.27■□□□□ 0.68
Nphp4P59240 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC19.27■□□□□ 0.68
Nphp4P59240 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC19.27■□□□□ 0.68
Nphp4P59240 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp4P59240 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp4P59240 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC19.27■□□□□ 0.68
Nphp4P59240 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nphp4P59240 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nphp4P59240 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.27■□□□□ 0.67
Nphp4P59240 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nphp4P59240 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nphp4P59240 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC19.26■□□□□ 0.67
Nphp4P59240 Gm43438-201ENSMUST00000198133 379 ntBASIC19.26■□□□□ 0.67
Nphp4P59240 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nphp4P59240 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nphp4P59240 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Nphp4P59240 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nphp4P59240 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp4P59240 Gm13689-201ENSMUST00000119360 685 ntBASIC19.25■□□□□ 0.67
Nphp4P59240 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.25■□□□□ 0.67
Nphp4P59240 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.25■□□□□ 0.67
Nphp4P59240 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC19.25■□□□□ 0.67
Nphp4P59240 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC19.25■□□□□ 0.67
Nphp4P59240 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Gm38102-201ENSMUST00000192791 1935 ntBASIC19.25■□□□□ 0.67
Nphp4P59240 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nphp4P59240 Gm44719-201ENSMUST00000206404 149 ntBASIC19.25■□□□□ 0.67
Nphp4P59240 Gm7067-201ENSMUST00000207698 1249 ntBASIC19.25■□□□□ 0.67
Nphp4P59240 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Nphp4P59240 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Gm25857-201ENSMUST00000082788 129 ntBASIC19.25■□□□□ 0.67
Nphp4P59240 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp4P59240 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nphp4P59240 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Nphp4P59240 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nphp4P59240 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nphp4P59240 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nphp4P59240 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Gm14127-201ENSMUST00000117906 678 ntBASIC19.24■□□□□ 0.67
Nphp4P59240 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Mir1894-201ENSMUST00000122802 81 ntBASIC19.24■□□□□ 0.67
Nphp4P59240 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nphp4P59240 AC110817.1-201ENSMUST00000225706 605 ntBASIC19.24■□□□□ 0.67
Nphp4P59240 AC125117.1-201ENSMUST00000228121 468 ntBASIC19.24■□□□□ 0.67
Nphp4P59240 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nphp4P59240 Gm5356-201ENSMUST00000093326 615 ntBASIC19.24■□□□□ 0.67
Nphp4P59240 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp4P59240 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nphp4P59240 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms