Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx3P50481 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lhx3P50481 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx3P50481 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.54□□□□□ -0.08
Lhx3P50481 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx3P50481 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx3P50481 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx3P50481 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx3P50481 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx3P50481 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lhx3P50481 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx3P50481 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx3P50481 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lhx3P50481 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lhx3P50481 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lhx3P50481 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Lhx3P50481 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Lhx3P50481 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.53□□□□□ -0.08
Lhx3P50481 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.53□□□□□ -0.08
Lhx3P50481 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lhx3P50481 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.53□□□□□ -0.08
Lhx3P50481 Gm44608-201ENSMUST00000206827 855 ntBASIC14.53□□□□□ -0.08
Lhx3P50481 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.53□□□□□ -0.08
Lhx3P50481 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Lhx3P50481 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lhx3P50481 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx3P50481 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx3P50481 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Lhx3P50481 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.52□□□□□ -0.08
Lhx3P50481 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx3P50481 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx3P50481 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx3P50481 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Lhx3P50481 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx3P50481 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx3P50481 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx3P50481 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Lhx3P50481 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Lhx3P50481 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Lhx3P50481 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Lhx3P50481 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.52□□□□□ -0.09
Lhx3P50481 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.52□□□□□ -0.09
Lhx3P50481 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Gm3436-201ENSMUST00000179930 840 ntBASIC14.52□□□□□ -0.09
Lhx3P50481 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.52□□□□□ -0.09
Lhx3P50481 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.52□□□□□ -0.09
Lhx3P50481 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx3P50481 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx3P50481 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx3P50481 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx3P50481 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx3P50481 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Lhx3P50481 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Lhx3P50481 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx3P50481 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx3P50481 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx3P50481 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx3P50481 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx3P50481 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.51□□□□□ -0.09
Lhx3P50481 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.51□□□□□ -0.09
Lhx3P50481 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lhx3P50481 Mir7684-201ENSMUST00000183858 60 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms