Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox2P48432 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox2P48432 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox2P48432 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox2P48432 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Sox2P48432 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.48□□□□□ -0.25
Sox2P48432 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Sox2P48432 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox2P48432 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.48□□□□□ -0.25
Sox2P48432 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox2P48432 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox2P48432 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Sox2P48432 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox2P48432 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Sox2P48432 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox2P48432 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox2P48432 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox2P48432 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Sox2P48432 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox2P48432 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox2P48432 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox2P48432 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Sox2P48432 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox2P48432 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox2P48432 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox2P48432 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Sox2P48432 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.47□□□□□ -0.25
Sox2P48432 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox2P48432 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.47□□□□□ -0.25
Sox2P48432 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.47□□□□□ -0.25
Sox2P48432 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Sox2P48432 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Sox2P48432 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox2P48432 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox2P48432 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox2P48432 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox2P48432 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sox2P48432 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms