Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Foxa1P35582 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Foxa1P35582 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.3□□□□□ -0.28
Foxa1P35582 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.3□□□□□ -0.28
Foxa1P35582 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Foxa1P35582 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Foxa1P35582 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.29□□□□□ -0.28
Foxa1P35582 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Foxa1P35582 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Foxa1P35582 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Foxa1P35582 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Foxa1P35582 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Foxa1P35582 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Gm29541-201ENSMUST00000191351 678 ntBASIC13.29□□□□□ -0.28
Foxa1P35582 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Foxa1P35582 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Foxa1P35582 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Foxa1P35582 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Foxa1P35582 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Foxa1P35582 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Gm13823-201ENSMUST00000119930 345 ntBASIC13.28□□□□□ -0.28
Foxa1P35582 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.28□□□□□ -0.28
Foxa1P35582 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Foxa1P35582 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Gm18766-201ENSMUST00000189811 808 ntBASIC13.28□□□□□ -0.28
Foxa1P35582 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Foxa1P35582 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.28□□□□□ -0.28
Foxa1P35582 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.28□□□□□ -0.28
Foxa1P35582 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Foxa1P35582 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Foxa1P35582 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.28□□□□□ -0.28
Foxa1P35582 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Foxa1P35582 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Foxa1P35582 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Foxa1P35582 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Foxa1P35582 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Foxa1P35582 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Foxa1P35582 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Foxa1P35582 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Foxa1P35582 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Foxa1P35582 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Foxa1P35582 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Foxa1P35582 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Foxa1P35582 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Foxa1P35582 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms