Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Vcam1P29533 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vcam1P29533 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vcam1P29533 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.41■□□□□ 0.22
Vcam1P29533 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.41■□□□□ 0.22
Vcam1P29533 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.41■□□□□ 0.22
Vcam1P29533 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.41■□□□□ 0.22
Vcam1P29533 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.41■□□□□ 0.22
Vcam1P29533 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Gm8602-201ENSMUST00000184045 607 ntBASIC16.41■□□□□ 0.22
Vcam1P29533 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.41■□□□□ 0.22
Vcam1P29533 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Vcam1P29533 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.41■□□□□ 0.22
Vcam1P29533 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.41■□□□□ 0.22
Vcam1P29533 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Vcam1P29533 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vcam1P29533 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.41■□□□□ 0.22
Vcam1P29533 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vcam1P29533 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.41■□□□□ 0.22
Vcam1P29533 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vcam1P29533 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Vcam1P29533 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vcam1P29533 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vcam1P29533 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vcam1P29533 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.4■□□□□ 0.22
Vcam1P29533 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.4■□□□□ 0.22
Vcam1P29533 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.4■□□□□ 0.22
Vcam1P29533 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Gm15806-201ENSMUST00000120696 955 ntBASIC16.4■□□□□ 0.22
Vcam1P29533 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.4■□□□□ 0.22
Vcam1P29533 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Gm18905-201ENSMUST00000205454 928 ntBASIC16.4■□□□□ 0.22
Vcam1P29533 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.4■□□□□ 0.22
Vcam1P29533 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.4■□□□□ 0.22
Vcam1P29533 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vcam1P29533 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Sybu-209ENSMUST00000228639 4113 ntBASIC16.4■□□□□ 0.22
Vcam1P29533 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcam1P29533 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Vcam1P29533 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Vcam1P29533 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Vcam1P29533 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.39■□□□□ 0.22
Vcam1P29533 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.39■□□□□ 0.22
Vcam1P29533 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.39■□□□□ 0.21
Vcam1P29533 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vcam1P29533 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Vcam1P29533 Gm5035-201ENSMUST00000215581 927 ntBASIC16.39■□□□□ 0.21
Vcam1P29533 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vcam1P29533 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcam1P29533 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms