Protein–RNA interactions for Protein: P23242

Gja1, Gap junction alpha-1 protein, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja1P23242 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Gja1P23242 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Gja1P23242 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.59□□□□□ -0.07
Gja1P23242 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.59□□□□□ -0.07
Gja1P23242 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Gm10275-202ENSMUST00000168697 495 ntBASIC14.59□□□□□ -0.07
Gja1P23242 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.59□□□□□ -0.07
Gja1P23242 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.59□□□□□ -0.07
Gja1P23242 Gm6745-201ENSMUST00000199216 526 ntBASIC14.59□□□□□ -0.07
Gja1P23242 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.59□□□□□ -0.07
Gja1P23242 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Gja1P23242 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Gm10275-201ENSMUST00000092620 635 ntBASIC14.59□□□□□ -0.07
Gja1P23242 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.59□□□□□ -0.07
Gja1P23242 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.59□□□□□ -0.07
Gja1P23242 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.59□□□□□ -0.07
Gja1P23242 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.59□□□□□ -0.07
Gja1P23242 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gja1P23242 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Gja1P23242 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gja1P23242 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Gja1P23242 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Gja1P23242 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.58□□□□□ -0.08
Gja1P23242 Gm12138-201ENSMUST00000122180 951 ntBASIC14.58□□□□□ -0.08
Gja1P23242 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.58□□□□□ -0.08
Gja1P23242 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.58□□□□□ -0.08
Gja1P23242 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Gja1P23242 Gm9797-201ENSMUST00000052902 613 ntBASIC14.58□□□□□ -0.08
Gja1P23242 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Gja1P23242 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Gja1P23242 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Gja1P23242 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.58□□□□□ -0.08
Gja1P23242 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gja1P23242 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Gja1P23242 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gja1P23242 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.57□□□□□ -0.08
Gja1P23242 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Gja1P23242 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.57□□□□□ -0.08
Gja1P23242 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Gm33320-201ENSMUST00000192232 530 ntBASIC14.57□□□□□ -0.08
Gja1P23242 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Gja1P23242 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.57□□□□□ -0.08
Gja1P23242 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.57□□□□□ -0.08
Gja1P23242 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.57□□□□□ -0.08
Gja1P23242 Gm6180-201ENSMUST00000065243 498 ntBASIC14.57□□□□□ -0.08
Gja1P23242 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Gja1P23242 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Gja1P23242 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gja1P23242 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.56□□□□□ -0.08
Gja1P23242 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms