Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Gm13464-201ENSMUST00000119418 935 ntBASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Mir6990-201ENSMUST00000183724 91 ntBASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp6P0C0A3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Gm43125-201ENSMUST00000201724 730 ntBASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp6P0C0A3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Gm9726-201ENSMUST00000180321 678 ntBASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp6P0C0A3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Gm43474-201ENSMUST00000196415 774 ntBASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chmp6P0C0A3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp6P0C0A3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms