Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.63□□□□□ -0.39
P04224 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.63□□□□□ -0.39
P04224 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Gm27704-201ENSMUST00000185094 107 ntBASIC12.63□□□□□ -0.39
P04224 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.63□□□□□ -0.39
P04224 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.63□□□□□ -0.39
P04224 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.63□□□□□ -0.39
P04224 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.63□□□□□ -0.39
P04224 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
P04224 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.63□□□□□ -0.39
P04224 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
P04224 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.63□□□□□ -0.39
P04224 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
P04224 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.62□□□□□ -0.39
P04224 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.62□□□□□ -0.39
P04224 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
P04224 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.62□□□□□ -0.39
P04224 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
P04224 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.62□□□□□ -0.39
P04224 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
P04224 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.62□□□□□ -0.39
P04224 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.62□□□□□ -0.39
P04224 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
P04224 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
P04224 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.62□□□□□ -0.39
P04224 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
P04224 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
P04224 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.61□□□□□ -0.39
P04224 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.61□□□□□ -0.39
P04224 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.61□□□□□ -0.39
P04224 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.61□□□□□ -0.39
P04224 Gm8318-201ENSMUST00000182954 872 ntBASIC12.61□□□□□ -0.39
P04224 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
P04224 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
P04224 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.61□□□□□ -0.39
P04224 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.61□□□□□ -0.39
P04224 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
P04224 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
P04224 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
P04224 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04224 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms