Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.16□□□□□ -0.3
P01852 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P01852 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P01852 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P01852 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.15□□□□□ -0.3
P01852 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P01852 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P01852 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P01852 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.15□□□□□ -0.3
P01852 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.15□□□□□ -0.3
P01852 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.15□□□□□ -0.3
P01852 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.15□□□□□ -0.3
P01852 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
P01852 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.15□□□□□ -0.3
P01852 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P01852 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01852 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.15□□□□□ -0.3
P01852 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
P01852 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
P01852 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
P01852 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
P01852 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.14□□□□□ -0.31
P01852 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
P01852 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
P01852 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.14□□□□□ -0.31
P01852 Gm13616-201ENSMUST00000120600 222 ntBASIC13.14□□□□□ -0.31
P01852 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.14□□□□□ -0.31
P01852 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
P01852 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Gm25948-201ENSMUST00000175334 112 ntBASIC13.14□□□□□ -0.31
P01852 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.14□□□□□ -0.31
P01852 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.14□□□□□ -0.31
P01852 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.14□□□□□ -0.31
P01852 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.14□□□□□ -0.31
P01852 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
P01852 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
P01852 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.14□□□□□ -0.31
P01852 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01852 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.13□□□□□ -0.31
P01852 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
P01852 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
P01852 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.13□□□□□ -0.31
P01852 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P01852 Gm15920-201ENSMUST00000118998 402 ntBASIC13.13□□□□□ -0.31
P01852 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.13□□□□□ -0.31
P01852 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.13□□□□□ -0.31
P01852 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms